hemberg-lab / SC3

A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments
http://bioconductor.org/packages/SC3
GNU General Public License v3.0
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Remove one N from the denominator of stability #57

Closed tallulandrews closed 6 years ago

tallulandrews commented 6 years ago

You are over-correcting the stability measure.

wikiselev commented 6 years ago

Hmm, I've received the same comment several month ago. Can you you provide an example showing that the original calculation is wrong?

wikiselev commented 6 years ago

Discussed with Tallulah and agreed that the second N is necessary. I will update the documentation explaining this.