Open gauravmoghe opened 2 years ago
Hi @gauravmoghe, when running the container you need to bind the ports from the container to your host machine:
that's the -p 8888:8888
part of the launch command otherwise you won't be able to reach jupyter inside the container via the URL.
Also, I think the PASSWORD
env var has been deprectaed in favor of JUPYTER_TOKEN
. Try running it like this:
docker run -p 8888:8888 -e JUPYTER_TOKEN=jupyter quay.io/cellgeni/scrna-seq-course:latest
Let us know how that goes
I downloaded the docker container using
docker run -p 8888:8888 -e PASSWORD="jupyter" quay.io/cellgeni/scrna-seq-course:v5.14
Then I load the image using the following code
$ docker run --user root -e GRANT_SUDO=yes <imageID>
and I get the following status message
However, when I put the link in Chrome, I get ERR_CONNECTION_REFUSED or ERR_FILE_NOT_FOUND
I tried changing 127.0.0.1 to my mac's IP address as suggested in a previous closed GitHub issue (https://github.com/hemberg-lab/scRNA.seq.course/issues/165) but that did not work. Running the docker run command without the sudo and --user arguments also does not work.
Thanks for any insights!