henryliangt / usyd

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Neurofibromatosis NF1 progress auto review software #36

Open henryliangt opened 1 year ago

henryliangt commented 1 year ago

Henry's though, algorithm, methods, records along the way and Article publication draft

Mimi Berman

Mimi LinkedIN

Literature Review

key task:

  1. photo landscape match based on highlight and boundary.

  2. Pixel scale down.

  3. metrics measure.

  4. compare module

  5. interface convenience of use

Keywords:

changes detection, changes detect of skin, changes detect of map

Associate Professor Eleanor Bruce

AFNR5502: Remote Sensing, GIS and Land Management

henryliangt commented 1 year ago

Neurofibromatosis type 1 (NF1) is a tumour suppressor disorder associated with a lifelong risk of malignancy and development of disfiguring cutaneous neurofibromas (CNFs). These CNFs can develop on all areas of the body and may number in their thousands. The size of these lesions can reach up to 4 cm in diameter. Whole body 3d Imaging is a new modality that has not been widely used in NF1 patients previously. As part of a joint project with collaborators from France and the USA (Professor Wolkenstein (Paris), Professor Blakeley (John Hopkins University), we have been imaging patients longitudinally to try to better understand the natural history of cutaneous neurofibromas. We also hope to use this imaging tool for analysis of outcomes following CNF treatment through blade based, laser, and oral therapies.

Purpose / Aim: This project will derive a new 3D image analysis algorithm to detect and measure CNFs using longitudinal (post treatment) whole body 3D imaging data. We will develop new deep learning algorithms, designed for longitudinal imaging data, such that we can characterise the changes in the CNFs over time. We hope that the outcomes of this project will help to direct outcome measures for future therapeutics in this patient population. This project will collaborate with clinicians at Royal North Shore Hospital and Westmead Hospital.

henryliangt commented 1 year ago

https://blog.csdn.net/Mr_sandman1994/article/details/80252971

https://blog.csdn.net/weixin_39989980/article/details/111431934

https://codeantenna.com/a/wEddu8BjD1

https://www.twblogs.net/a/5b8229062b717737e032be4d/?lang=zh-cn

henryliangt commented 1 year ago

Segment Approach

This might be more helpful for further analysis.

henryliangt commented 1 year ago

active contour

Snake

GVFSnake

henryliangt commented 1 year ago

level set

https://zhuanlan.zhihu.com/p/140318665

https://cloud.tencent.com/developer/article/1631066

henryliangt commented 1 year ago

Interactive image segmentation

Graph Cuts

http://shichaoxin.com/2018/10/21/%E5%9B%BE%E5%83%8F%E5%88%86%E5%89%B2-Graph-Cut%E7%AE%97%E6%B3%95/

henryliangt commented 1 year ago

Image segmentation Theory introduction

henryliangt commented 1 year ago

raw file https://stackoverflow.com/questions/2422050/raw-image-processing-in-python

https://www.kaggle.com/code/tsilveira/raw-image-processing

henryliangt commented 1 year ago

https://neptune.ai/blog/image-processing-python-libraries-for-machine-learning

henryliangt commented 1 year ago

Ortonne wolkenstein classification of NFs.pdf

henryliangt commented 1 year ago

How JPG Works