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henrypinkard / Pygellan

[DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan
BSD 3-Clause "New" or "Revised" License
14 stars 3 forks source link

Add ability to process acquired images in Python after acquisition before saving #27

Open henrypinkard opened 4 years ago

henrypinkard commented 4 years ago

In many situations, would be good to be able to apply some arbitrary transformation to images in using Python libraries and then send them back into the regualar Java image processing queue. Basicially the same idea as this, but implemented in pure Python

Maybe could do this with a ZMQ client server architecture where the client runs as micromanager processor plugin, and the server runs in python and returns image or none?