If there's only 1 sample, requiring hits<1 makes no sense

hepcat72 / vcfSampleCompare

Filter and rank variant call files (VCF) based on comparative evidence ratios between groups of samples.

GNU General Public License v3.0

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If there's only 1 sample, requiring hits<1 makes no sense #2

Closed hepcat72 closed 6 years ago

hepcat72 commented 7 years ago

The default filter that not all the samples have a variant is a problem when there's only 1 sample. Change the default in this case (or don't impose that filter). And allow the user to set it.

hepcat72 commented 6 years ago

This is irrelevant in version 2.