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hetio / hetionet

Hetionet: an integrative network of disease
https://neo4j.het.io
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Local files #39

Closed victorconan closed 3 years ago

victorconan commented 3 years ago

Hi! I am interested in the completed hetnet and I saw this from the import.ipynb:

Several files were not uploaded to dhimmel/integrate due to filesize. These files are copied over locally.

Is it possible to download those local files?

Thanks!

dhimmel commented 3 years ago

Yes this is in import.ipynb, which was a script to populate this reposity. This notebook copies files from dhimmel/integrate, some on the GitHub and some created locally, to populate hetio/hetionet.

Those local files end up getting tracked in hetio/hetionet. Specifically it looks like the files that were imported from local paths were:

  1. the permuted JSON networks at hetnet/permuted/json/
  2. the permuted neo4j networks at hetnet/permuted/neo4j/ on the neo4j-2.3 branch.

I am interested in the completed hetnet

This repo contains the completed hetnet in many different formats. import.ipynb doesn't sound relevant to your use case, unless you are trying to create a different network with a distinct data distribution repo like this.

victorconan commented 3 years ago

I see. Thanks, Daniel!