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hexylena / argparse2tool

transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
Apache License 2.0
26 stars 10 forks source link

[WIP]: changes that accumulate during working on checkm parsers #65

Open bernt-matthias opened 4 years ago

bernt-matthias commented 4 years ago

Will add commits as they come. Early feedback is welcome.

bernt-matthias commented 4 years ago

Galaxy part seems ready. But now cwl can't cope anymore...

hexylena commented 4 years ago

looks like we might need to update the cwl example, looks fine though to use the output of tmp.cwl / tmp-sub.cwl