21.05 version with conda by default.

hexylena / docker-rstudio-notebook

RStudio as a Galaxy Interactive Environment

MIT License

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21.05 version with conda by default. #36

Closed bgruening closed 3 years ago

bgruening commented 3 years ago

This is adding miniconda (and mamba) to the image and configures it to use that env by default.

I broke nginx here, no clue how :( maybe the new base image? However using the RStudio server on port 8787 works for me. Will wait for Helena to help me out here.

we could remove the compiler and a lot of libraries now from the image, as those could be installed via conda now

hexylena commented 3 years ago

Fine to bypass nginx. It was mostly there for path based proxting. We can re add it later. Good luck!

bgruening commented 3 years ago

Thanks @hexylena but something like PROXY_PREFIX probably also does not work with this, does it?

hexylena commented 3 years ago

no, afaict that feature was broken, and while I see there was support for path based proxying, it isn't clear that it works or even how.