search

hiclib / iced

Normalizing Hi-C contact counts efficiently
http://members.cbio.mines-paristech.fr/~nvaroquaux/iced/
Other
29 stars 19 forks source link

We need better documentation #9

Open NelleV opened 8 years ago

NelleV commented 8 years ago

Tutorial explaining:

  1. the data format
  2. how to load it
  3. why filtering ?
  4. Normalization.
  5. io
kpalin commented 4 years ago

Most definitely so! Just a link to a website with the documentation or citation to a manuscript would be a great improvement.

NelleV commented 4 years ago

We do have a website already: http://members.cbio.mines-paristech.fr/~nvaroquaux/iced/

Thanks, Nelle

kpalin commented 4 years ago

Thanks,

I did see the link, but the page seems to be "PASTIS: POISSON-BASED ALGORITHM FOR STABLE INFERENCE OF DNA STRUCTURE" whose connection to iced is not clear. I was more thinking of http://members.cbio.mines-paristech.fr/~nvaroquaux/iced/tutorial/index.html

On Fri, 4 Sep 2020 at 14:39, Nelle Varoquaux notifications@github.com wrote:

We do have a website already: http://members.cbio.mines-paristech.fr/~nvaroquaux/iced/

Thanks, Nelle

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/hiclib/iced/issues/9#issuecomment-687091306, or unsubscribe https://github.com/notifications/unsubscribe-auth/AAEGMCCEN5IL5MVXJAYF7XLSEDGXBANCNFSM4B3MDCAA .

-- Kimmo Palin