search

highmed / highmed-dsf

HiGHmed Data Sharing Framework funded by the German Federal Ministry of Education and Research (BMBF, grant ids: 01ZZ1802E and 01ZZ1802A)
Apache License 2.0
32 stars 20 forks source link

`mvn install` fails to install successfully #400

Closed Threated closed 1 year ago

Threated commented 1 year ago

After cloning the repo and running mvn install it crashes with: Failed to execute goal org.apache.maven.plugins:maven-failsafe-plugin:3.0.0-M7:verify (default) on project dsf-bpe-server The crashlog says: org.postgresql.util.PSQLException: ERROR: DROP DATABASE cannot be executed within a pipeline

Docker version 23.0.1, build a5ee5b1

Java version:

openjdk version "11.0.18" 2023-01-17
OpenJDK Runtime Environment (build 11.0.18+10-post-Ubuntu-0ubuntu122.04)
OpenJDK 64-Bit Server VM (build 11.0.18+10-post-Ubuntu-0ubuntu122.04, mixed mode)

Full crashlog xml document

hhund commented 1 year ago

Hello, @Threated

thank you for the report. With one of the last minor releases PostgreSQL made a modification to the behavior of pipelines. Commands like CREATE DATABASE and DROP DATABASE now need to be executed as individual commands. See for example: https://www.postgresql.org/message-id/841565.1677254194%40sss.pgh.pa.us

If you want to build the current version of the DSF, I just pushed a fix (a6d0525) to the branch: issues/400_postgresql_pipelines