fatal error: openssl/sha.h: No such file or directory

[slowkow]

Just trying to install higlass-server

Here are my steps so far:

mkdir -p ~/work/github.com/hms-dbmi
cd ~/work/github.com/hms-dbmi

git clone git@github.com:hms-dbmi/higlass-server.git

cd higlass-server

conda create -n higlass-server python=3

conda install cython numpy

pip install --upgrade -r ./requirements.txt

Finally, I get:

udc.c:39:25: fatal error: openssl/sha.h: No such file or directory
    compilation terminated.

I guess I need to get the openssl dependency set up correctly... I'll post again if I find a fix.

I'm trying to compile on the Broad servers.

If you want the full error log, here it is:

  Running setup.py develop for pybbi
    Complete output from command /medpop/srlab/slowikow/miniconda2/envs/higlass-server/bin/python -c "import setuptools, tokenize;__file__='/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" develop --no-deps:
    Compiling /medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/bbi/cbbi.pyx because it depends on /medpop/srlab/slowikow/miniconda2/envs/higlass-server/lib/python3.6/site-packages/Cython/Includes/libc/stdlib.pxd.
    [1/1] Cythonizing /medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/bbi/cbbi.pyx
    running develop
    running egg_info
    writing pybbi.egg-info/PKG-INFO
    writing dependency_links to pybbi.egg-info/dependency_links.txt
    writing requirements to pybbi.egg-info/requires.txt
    writing top-level names to pybbi.egg-info/top_level.txt
    reading manifest file 'pybbi.egg-info/SOURCES.txt'
    reading manifest template 'MANIFEST.in'
    warning: bbi/cbbi.pyx:542:8: Buffer unpacking not optimized away.
    warning: bbi/cbbi.pyx:542:8: Buffer unpacking not optimized away.
    warning: bbi/cbbi.pyx:594:8: Buffer unpacking not optimized away.
    warning: bbi/cbbi.pyx:594:8: Buffer unpacking not optimized away.
    warning: bbi/cbbi.pyx:622:23: local variable 'elements' referenced before assignment
    warning: bbi/cbbi.pyx:626:20: local variable 'elements' referenced before assignment
    warning: bbi/cbbi.pyx:630:20: local variable 'elements' referenced before assignment
    warning: bbi/cbbi.pyx:644:30: local variable 'elements' referenced before assignment
    warning: bbi/cbbi.pyx:661:20: local variable 'elements' referenced before assignment
    warning: no previously-included files matching '__pycache__/*' found anywhere in distribution
    warning: no previously-included files matching '*.o' found anywhere in distribution
    warning: no previously-included files matching '*.a' found anywhere in distribution
    warning: no previously-included files matching '*.so' found anywhere in distribution
    warning: no previously-included files matching '*.pyd' found anywhere in distribution
    warning: no previously-included files matching '*.pyc' found anywhere in distribution
    warning: no previously-included files matching '.git*' found anywhere in distribution
    warning: no previously-included files matching '.deps/*' found anywhere in distribution
    warning: no previously-included files matching '.DS_Store' found anywhere in distribution
    writing manifest file 'pybbi.egg-info/SOURCES.txt'
    running build_ext
    cd src && make
    make[1]: Entering directory `/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src'
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o aliType.o -c aliType.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o annoAssembly.o -c annoAssembly.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o annoFilter.o -c annoFilter.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o annoFormatter.o -c annoFormatter.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o annoFormatTab.o -c annoFormatTab.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o annoGrator.o -c annoGrator.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o annoGrateWig.o -c annoGrateWig.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o annoGratorQuery.o -c annoGratorQuery.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o annoOption.o -c annoOption.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o annoRow.o -c annoRow.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o annoStreamer.o -c annoStreamer.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o annoStreamBigBed.o -c annoStreamBigBed.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o annoStreamBigWig.o -c annoStreamBigWig.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o annoStreamTab.o -c annoStreamTab.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o annoStreamVcf.o -c annoStreamVcf.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o apacheLog.o -c apacheLog.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o asParse.o -c asParse.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o axt.o -c axt.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o axtAffine.o -c axtAffine.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o bamFile.o -c bamFile.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o base64.o -c base64.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o basicBed.o -c basicBed.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o bbiRead.o -c bbiRead.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o bbiWrite.o -c bbiWrite.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o bedTabix.o -c bedTabix.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o bigBed.o -c bigBed.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o binRange.o -c binRange.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o bits.o -c bits.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o blastOut.o -c blastOut.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o blastParse.o -c blastParse.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o boxClump.o -c boxClump.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o boxLump.o -c boxLump.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o bPlusTree.o -c bPlusTree.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o bwgCreate.o -c bwgCreate.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o bwgQuery.o -c bwgQuery.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o bwgValsOnChrom.o -c bwgValsOnChrom.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o cda.o -c cda.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o chain.o -c chain.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o chainBlock.o -c chainBlock.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o chainConnect.o -c chainConnect.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o chainToAxt.o -c chainToAxt.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o chainToPsl.o -c chainToPsl.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o cheapcgi.o -c cheapcgi.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o cirTree.o -c cirTree.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o codebias.o -c codebias.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o colHash.o -c colHash.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o common.o -c common.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o correlate.o -c correlate.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o crTree.o -c crTree.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o dgRange.o -c dgRange.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o diGraph.o -c diGraph.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o dlist.o -c dlist.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o dnaLoad.o -c dnaLoad.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o dnaMarkov.o -c dnaMarkov.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o dnaMotif.o -c dnaMotif.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o dnaseq.o -c dnaseq.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o dnautil.o -c dnautil.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o dtdParse.o -c dtdParse.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o dyOut.o -c dyOut.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o dystring.o -c dystring.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o elmTree.o -c elmTree.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o emblParse.o -c emblParse.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o errCatch.o -c errCatch.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o errAbort.o -c errAbort.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o fa.o -c fa.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o ffAli.o -c ffAli.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o ffScore.o -c ffScore.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o fieldedTable.o -c fieldedTable.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o filePath.o -c filePath.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o fixColor.o -c fixColor.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o flydna.o -c flydna.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o fof.o -c fof.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgCourier10.o -c font/mgCourier10.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgCourier12.o -c font/mgCourier12.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgCourier14.o -c font/mgCourier14.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgCourier18.o -c font/mgCourier18.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgCourier24.o -c font/mgCourier24.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgCourier34.o -c font/mgCourier34.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgCourier8.o -c font/mgCourier8.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgHelvetica10.o -c font/mgHelvetica10.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgHelvetica12.o -c font/mgHelvetica12.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgHelvetica14.o -c font/mgHelvetica14.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgHelvetica18.o -c font/mgHelvetica18.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgHelvetica24.o -c font/mgHelvetica24.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgHelvetica34.o -c font/mgHelvetica34.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgHelvetica8.o -c font/mgHelvetica8.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgHelveticaBold10.o -c font/mgHelveticaBold10.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgHelveticaBold12.o -c font/mgHelveticaBold12.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgHelveticaBold14.o -c font/mgHelveticaBold14.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgHelveticaBold18.o -c font/mgHelveticaBold18.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgHelveticaBold24.o -c font/mgHelveticaBold24.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgHelveticaBold34.o -c font/mgHelveticaBold34.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgHelveticaBold8.o -c font/mgHelveticaBold8.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgSixhi6.o -c font/mgSixhi6.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgSail8.o -c font/mgSail8.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgTimes10.o -c font/mgTimes10.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgTimes12.o -c font/mgTimes12.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgTimes14.o -c font/mgTimes14.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgTimes18.o -c font/mgTimes18.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgTimes24.o -c font/mgTimes24.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgTimes34.o -c font/mgTimes34.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgTimes8.o -c font/mgTimes8.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o font/mgMenlo12.o -c font/mgMenlo12.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o fq.o -c fq.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o fuzzyShow.o -c fuzzyShow.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o gapCalc.o -c gapCalc.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o gdf.o -c gdf.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o gemfont.o -c gemfont.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o genomeRangeTree.o -c genomeRangeTree.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o gfNet.o -c gfNet.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o gff.o -c gff.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o gff3.o -c gff3.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o gfxPoly.o -c gfxPoly.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o gifLabel.o -c gifLabel.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o hacTree.o -c hacTree.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o hash.o -c hash.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o hex.o -c hex.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o histogram.o -c histogram.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o hmmPfamParse.o -c hmmPfamParse.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o hmmstats.o -c hmmstats.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o htmlPage.o -c htmlPage.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o htmshell.o -c htmshell.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o hmac.o -c hmac.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o https.o -c https.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o intExp.o -c intExp.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o intValTree.o -c intValTree.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o internet.o -c internet.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o itsa.o -c itsa.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o iupac.o -c iupac.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o jointalign.o -c jointalign.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o jpegSize.o -c jpegSize.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o jsonParse.o -c jsonParse.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o jsonWrite.o -c jsonWrite.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o keys.o -c keys.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o knetUdc.o -c knetUdc.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o kxTok.o -c kxTok.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o linefile.o -c linefile.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o lineFileOnBigBed.o -c lineFileOnBigBed.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o localmem.o -c localmem.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o log.o -c log.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o longToList.o -c longToList.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o maf.o -c maf.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o mafFromAxt.o -c mafFromAxt.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o mafScore.o -c mafScore.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o mailViaPipe.o -c mailViaPipe.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o md5.o -c md5.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o memalloc.o -c memalloc.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o memgfx.o -c memgfx.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o meta.o -c meta.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o metaWig.o -c metaWig.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o mgCircle.o -c mgCircle.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o mgPolygon.o -c mgPolygon.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o mime.o -c mime.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o net.o -c net.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o nib.o -c nib.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o nibTwo.o -c nibTwo.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o nt4.o -c nt4.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o numObscure.o -c numObscure.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o obscure.o -c obscure.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o oldGff.o -c oldGff.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o oligoTm.o -c oligoTm.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o options.o -c options.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o osunix.o -c osunix.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o pairHmm.o -c pairHmm.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o pairDistance.o -c pairDistance.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o paraFetch.o -c paraFetch.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o peakCluster.o -c peakCluster.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o phyloTree.o -c phyloTree.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o pipeline.o -c pipeline.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o portimpl.o -c portimpl.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o pngwrite.o -c pngwrite.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o psGfx.o -c psGfx.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o psPoly.o -c psPoly.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o pscmGfx.o -c pscmGfx.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o psl.o -c psl.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o pslGenoShow.o -c pslGenoShow.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o pslShow.o -c pslShow.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o pslTbl.o -c pslTbl.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o pslTransMap.o -c pslTransMap.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o pthreadDoList.o -c pthreadDoList.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o pthreadWrap.o -c pthreadWrap.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o qa.o -c qa.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o quickHeap.o -c quickHeap.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o quotedP.o -c quotedP.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o ra.o -c ra.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o rainbow.o -c rainbow.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o raToStruct.o -c raToStruct.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o rbTree.o -c rbTree.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o rangeTree.o -c rangeTree.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o regexHelper.o -c regexHelper.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o repMask.o -c repMask.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o rle.o -c rle.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o rnautil.o -c rnautil.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o rqlEval.o -c rqlEval.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o rqlParse.o -c rqlParse.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o rudp.o -c rudp.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o scoreWindow.o -c scoreWindow.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o seg.o -c seg.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o seqOut.o -c seqOut.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o seqStats.o -c seqStats.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o servBrcMcw.o -c servBrcMcw.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o servCrunx.o -c servCrunx.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o servcis.o -c servcis.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o servcl.o -c servcl.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o servmsII.o -c servmsII.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o servpws.o -c servpws.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o shaRes.o -c shaRes.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o slog.o -c slog.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o snof.o -c snof.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o snofmake.o -c snofmake.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o snofsig.o -c snofsig.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o spaceSaver.o -c spaceSaver.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o spacedColumn.o -c spacedColumn.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o spacedSeed.o -c spacedSeed.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o splatAli.o -c splatAli.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o sqlList.o -c sqlList.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o sqlNum.o -c sqlNum.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o subText.o -c subText.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o sufa.o -c sufa.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o sufx.o -c sufx.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o synQueue.o -c synQueue.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o tabRow.o -c tabRow.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o tagStorm.o -c tagStorm.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o textOut.o -c textOut.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o tokenizer.o -c tokenizer.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o trix.o -c trix.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o twoBit.o -c twoBit.c
    gcc -g -pthread -fPIC -static -Wall -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_x86_64 -L/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src/x86_64 -L/usr/lib -lz -lc -lpthread -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/include -I/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src -I/usr/include -o udc.o -c udc.c
    udc.c:39:25: fatal error: openssl/sha.h: No such file or directory
    compilation terminated.
    make[1]: *** [udc.o] Error 1
    make[1]: Leaving directory `/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/src'
    make: *** [src/x86_64/libkent.a] Error 2
    Compiling libkent...
    LIBRARY_PATH: /broad/software/free/Linux/redhat_6_x86_64/pkgs/r_3.3.0/lib64:/broad/software/free/Linux/redhat_6_x86_64/pkgs/curl_7.47.1/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/pcre_8.38/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/xz_5.2.2/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/zlib_1.2.6/lib64:/broad/software/free/Linux/redhat_6_x86_64/pkgs/bzip2_1.0.6/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/libiconv_1.13.1/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/gcc_5.2.0/lib64:/broad/software/free/Linux/redhat_6_x86_64/pkgs/gcc_5.2.0/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/netcdf_4.3.3.1/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/gcc_4.9.0/lib64:/broad/software/free/Linux/redhat_6_x86_64/pkgs/gcc_4.9.0/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/ruby_2.0.0-p451/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/vim_7.4/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/jdk1.8.0_121/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/cmake_2.8.11.2/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/automake_1.12.5/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/perl_5.18.1/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/git_2.5.0/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/pigz_2.1.6/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/imagemagick_6.9.0-5/lib:/broad/software/free/Linux/redhat_6_x86_64/pkgs/libevent_2.0.16-stable/lib:/home/unix/slowikow/.linuxbrew/lib
    C_INCLUDE_PATH: /medpop/srlab/slowikow/miniconda2/envs/higlass-server/include/openssl:/broad/software/free/Linux/redhat_6_x86_64/pkgs/curl_7.47.1/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/pcre_8.38/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/xz_5.2.2/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/zlib_1.2.6/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/bzip2_1.0.6/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/libiconv_1.13.1/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/gcc_5.2.0/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/netcdf_4.3.3.1/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/gcc_4.9.0/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/ruby_2.0.0-p451/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/vim_7.4/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/jdk1.8.0_121/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/cmake_2.8.11.2/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/automake_1.12.5/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/perl_5.18.1/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/git_2.5.0/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/pigz_2.1.6/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/imagemagick_6.9.0-5/include:/broad/software/free/Linux/redhat_6_x86_64/pkgs/libevent_2.0.16-stable/include
    Traceback (most recent call last):
      File "", line 1, in 
      File "/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/setup.py", line 97, in 
        'build_ext': build_ext
      File "/medpop/srlab/slowikow/miniconda2/envs/higlass-server/lib/python3.6/site-packages/setuptools/__init__.py", line 129, in setup
        return distutils.core.setup(**attrs)
      File "/medpop/srlab/slowikow/miniconda2/envs/higlass-server/lib/python3.6/distutils/core.py", line 148, in setup
        dist.run_commands()
      File "/medpop/srlab/slowikow/miniconda2/envs/higlass-server/lib/python3.6/distutils/dist.py", line 955, in run_commands
        self.run_command(cmd)
      File "/medpop/srlab/slowikow/miniconda2/envs/higlass-server/lib/python3.6/distutils/dist.py", line 974, in run_command
        cmd_obj.run()
      File "/medpop/srlab/slowikow/miniconda2/envs/higlass-server/lib/python3.6/site-packages/setuptools/command/develop.py", line 36, in run
        self.install_for_development()
      File "/medpop/srlab/slowikow/miniconda2/envs/higlass-server/lib/python3.6/site-packages/setuptools/command/develop.py", line 136, in install_for_development
        self.run_command('build_ext')
      File "/medpop/srlab/slowikow/miniconda2/envs/higlass-server/lib/python3.6/distutils/cmd.py", line 313, in run_command
        self.distribution.run_command(command)
      File "/medpop/srlab/slowikow/miniconda2/envs/higlass-server/lib/python3.6/distutils/dist.py", line 974, in run_command
        cmd_obj.run()
      File "/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/setup.py", line 47, in run
        check_call(['make', 'build-c'])
      File "/medpop/srlab/slowikow/miniconda2/envs/higlass-server/lib/python3.6/subprocess.py", line 291, in check_call
        raise CalledProcessError(retcode, cmd)
    subprocess.CalledProcessError: Command '['make', 'build-c']' returned non-zero exit status 2.

    ----------------------------------------
Command "/medpop/srlab/slowikow/miniconda2/envs/higlass-server/bin/python -c "import setuptools, tokenize;__file__='/medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" develop --no-deps" failed with error code 1 in /medpop/srlab/slowikow/work/github.com/hms-dbmi/higlass-server/src/pybbi/

[slowkow]

Hooray! The fix was easy:

use .openssl-1.0.2g

# now try again, and it works
pip install --upgrade -r ./requirements.txt