hillerlab / GenomeAlignmentTools

Tools for improving the sensitivity and specificity of genome alignments
MIT License
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RepeatFiller error #9

Open yuzhenpeng opened 3 years ago

yuzhenpeng commented 3 years ago

Dear Michael,

Recently, I want to use RepeatFiller in my analysis. But I got some problems. Could you please give me some help.

Traceback (most recent call last): File "/public4/home/sc56340/genome/bin/RepeatFiller.py", line 396, in <module> curMiniBlockLines = GetChainBlockFromLastzOutput(allMiniChainLines, next_pos) File "/public4/home/sc56340/genome/bin/RepeatFiller.py", line 224, in GetChainBlockFromLastzOutput raise ValueError('ERROR! allMiniChainsSplit start separator line at position ' + str(position) + ' does not start with LINE...') ValueError: ERROR! allMiniChainsSplit start separator line at position 0 does not start with LINE...

Thank you. @MichaelHiller