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hillerlab / make_lastz_chains

Portable solution to generate genome alignment chains using lastz
MIT License
49 stars 8 forks source link

RepeatFiller #22

Closed Sandhyash closed 1 year ago

Sandhyash commented 1 year ago

HgAutomate::run("TEMP_run.lastz"...) called at make_lastz_chains/doLastzChains/HgRemoteScript.pm line 117

HgRemoteScript::execute(HgRemoteScript=HASH(0x557801b9a758)) called at make_lastz_chains/doLastzChains/doLastzChain.pl line 370

main::doPartition() called at make_lastz_chains/doLastzChains/HgStepManager.pm line 169

HgStepManager::execute(HgStepManager=HASH(0x557801b45280)) called at make_lastz_chains/doLastzChains/doLastzChain.pl line 877

kirilenkobm commented 1 year ago

Hi @Sandhyash

pls try the updated pipeline version and let me know if the issue still persists.