Idea for the future: add a module that accumulates detailed statistics for each pipeline step.
Like, as how many chains we get for each chromosome after axtChain, how many blocks of what length, how many new blocks we get at the fill chain step, and other information that may be relevant for QC.
Idea for the future: add a module that accumulates detailed statistics for each pipeline step. Like, as how many chains we get for each chromosome after axtChain, how many blocks of what length, how many new blocks we get at the fill chain step, and other information that may be relevant for QC.