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hivdb / covid-drdb-payload

A relational database of SARS-CoV-2 resistance data.
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intra-host prolonged infection: Voloch21, 10.1093/ve/veab078 #194

Open philiptzou opened 2 years ago

philiptzou commented 2 years ago

Another case of intra-host prolonged infection like Sabin22. SRA/GISAID sequences are both available. Discuss this with Bob first before entering.

philiptzou commented 2 years ago

SRA sequences are found: PRJNA675840.txt

CodFreq files: codfreq1.zip, codfreq2.zip, codfreq3.zip

Sierra reports: NGS-analysis-reports_1649140128216.zip

KaimingTao commented 1 year ago

Run the NGS, to check the mutations. Maybe not enter it.

KaimingTao commented 1 year ago

The accession identifier was not provided, the supplemental tables were missing.