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hivdb / covid-drdb-payload

A relational database of SARS-CoV-2 resistance data.
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Uriu23b - 10.1101/2023.09.07.556636 #988

Closed shegocaga closed 10 months ago

shegocaga commented 11 months ago

Uriu23b - 10.1101/2023.09.07.556636 #954

shegocaga commented 11 months ago

I'm not sure what upper-limit to use for the IC50 values

KaimingTao commented 11 months ago

@shegocaga please remove Figure 1E data. It's not NT50 assay.

For IC50 please use use the Figure 1J row 4.

775 ug/ml for Beb 26042 for Sot 4200 for Cil 2600 for Tix 2100 for Cil + Tix

shegocaga commented 11 months ago

Were you wanting me to only collect the 4th row of Figure 1J and remove the first 3 rows? Also, were you wanting me to use those values exactly and also use ug/ml as the units? I thought you might be asking me to change the values to ug/ml so that we may find a suitable upper-limit, but then the error comes from using these units.

KaimingTao commented 11 months ago

@shegocaga please multiple the value by 1000 and use ng/ml, otherwise a lot of thing need to be changed. Many thanks.

shegocaga commented 10 months ago

In order to fit the potency values into ng/ml, I set the upper-limit of values to 1,000,000