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hkmztrk / DeepDTA

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I have some questions, can you help me！！！ #36

Closed Sentence99 closed 1 year ago

Sentence99 commented 1 year ago

When I run deepdta-toy/run_experiments.py, I always have Traceback (most recent call last): File "run_experiments.py", line 551, in prepare_new_data(FLAGS. test_path, test=True) File "C:\Users\75172\Desktop\School of Life Sciences\code\DeepDTA-master\deepdta-toy\testdatahelper.py", line 14, in prepare_new_data prots = read_proteins(fpath) File "C:\Users\75172\Desktop\School of Life Sciences\code\DeepDTA-master\deepdta-toy\testdatahelper.py", line 60, in read_proteins with open(filename) as f: FileNotFoundError: [Errno 2] No such file or directory: '/data/mytest/proteins.fasta' this mistake

hkmztrk commented 1 year ago

Hi @huangwanhua99

in case you haven't solve this, the error message indicates that it can't find the files that are needed to run the toy experiment. Please either download the example files from here https://github.com/hkmztrk/DeepDTA/tree/master/deepdta-toy/data or provide your own set of inputs.