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Optimise "full list" (first option) in batch differential expression function #23

Open vickymorrison opened 10 months ago

vickymorrison commented 10 months ago

Copied from other board. Written by Stefan.

According to Alex, the first option in batch differential expression can be optimised with presto "simultaneously for all clusters (or any other division of the dataset) in basically the same amount of time as it takes to calculate it for one cluster." https://this-is-biomage.slack.com/archives/C0250TDU1PF/p1684945321380279?thread_ts=1684876938.521529&cid=C0250TDU1PF

Goals Implement the required changes