hms-dbmi-cellenics / issues

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Allow export as csv for volcano even if it cannot be plotted #86

Closed StefanBabukov closed 5 months ago

StefanBabukov commented 8 months ago

The volcano plot has an extra message: For the selected comparison, there are fewer than 3 samples with the minimum number of cells (10). Volcano plot requires both p-values and logFC values, therefore the plot cannot be rendered

In cases like this the plot is not rendered. The problem is that some users still want to export the data as csv but this is also not possible after disabling the plot rendering in cases like this.

Example - https://this-is-biomage.slack.com/archives/C01A1DRDXUJ/p1698683760511459 Goals

Allow the users to export csv data even if the plot cannot be rendered.