Hi,
I am trying to plot with UpsetR with a data that look like this
I would like to make the query based on Swarming columns, and red for 1, blue for 0 as a stacked barplot in UpSetR, but then it told me
"Error in [.data.frame(temp_data, , start_col:new_end) :
undefined columns selected
In addition: Warning message:
In func(query, ...) :
Intersection or set may not be present in data set. Please refer to matrix."
Following is my code:
Any suggestions?
upset(pa14,
mainbar.y.label = "Number of strains",
sets.x.label = "Strain numbers",
query.legend = "top",
queries = list(
list(query = elements,
params = list("Swarming", c(0,1)), color = "red", active = T,query.name = "High Swarming"),
list(query = elements,
params = list("Swarming", c(0)), color = "blue", active = T,query.name = "Low Swarming")
))
Hi, I am trying to plot with UpsetR with a data that look like this
I would like to make the query based on Swarming columns, and red for 1, blue for 0 as a stacked barplot in UpSetR, but then it told me
"Error in
[.data.frame(temp_data, , start_col:new_end) : undefined columns selected In addition: Warning message: In func(query, ...) : Intersection or set may not be present in data set. Please refer to matrix."Following is my code: Any suggestions? upset(pa14, mainbar.y.label = "Number of strains", sets.x.label = "Strain numbers", query.legend = "top", queries = list( list(query = elements, params = list("Swarming", c(0,1)), color = "red", active = T,query.name = "High Swarming"), list(query = elements, params = list("Swarming", c(0)), color = "blue", active = T,query.name = "Low Swarming") ))