hms-dbmi / dseqr

single-cell and bulk RNA-seq analyses from counts → pathways → drug candidates.
https://docs.dseqr.com
Other
20 stars 4 forks source link

don't filter non-expressed genes #113

Closed alexvpickering closed 3 years ago

alexvpickering commented 5 years ago

Issue came up presenting SJIA data where a particular gene of interest, IGHE, was not available to show. In this particular case, IGHE was filtered as only a few counts were measured.

I think it it will make things more explicit to make all detected genes searchable so that there is no ambiguity (am I searching the wrong symbol? was the gene filtered? is it not showing up for some other reason?)