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hms-dbmi / dseqr

single-cell and bulk RNA-seq analyses from counts → pathways → drug candidates.
https://docs.dseqr.com
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Move custom gene set in Pathways tab to Datasets tab #138

Closed alexvpickering closed 4 years ago

alexvpickering commented 4 years ago

The thought here is that when choosing to look at a single/few genes it is more helpful to see either the raw or normalized counts for multiple groups (e.g. control, low ferritin, high ferritin) as opposed to a single measure of difference between two groups (still reasonable when looking at many genes within a pathway). Moving this to the Datasets tab will allow for more than two group selections. It also makes sense as it won't be tied to a specific contrast as with pathways.

alexvpickering commented 4 years ago

This is what it looks like so far:

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