When I run the 'de novo' section in the tutorial for Pagoda on the pollen data, I get the following error:
Error in eval(expr, envir, enclos) : object 'n' not found
Upon debugging, the error stems from this part of the code:
x <- RMTstat::WishartMaxPar(n.cells, varm$n)
varm$pm <- x$centering - (1.206533574582) * x$scaling
varm$pv <- (1.607781034581) * x$scaling
clvlm <- lm(var ~ 0 + pm + n, data = varm)
Hello,
When I run the 'de novo' section in the tutorial for Pagoda on the pollen data, I get the following error: Error in eval(expr, envir, enclos) : object 'n' not found
Upon debugging, the error stems from this part of the code: x <- RMTstat::WishartMaxPar(n.cells, varm$n) varm$pm <- x$centering - (1.206533574582) * x$scaling varm$pv <- (1.607781034581) * x$scaling clvlm <- lm(var ~ 0 + pm + n, data = varm)
Thanks, Sam