Error in checkSlotAssignment(object, name, value)

hms-dbmi / scde

R package for analyzing single-cell RNA-seq data

http://pklab.med.harvard.edu/scde

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Error in checkSlotAssignment(object, name, value) #44

Closed xuesongjing closed 6 years ago

xuesongjing commented 7 years ago

running scde.error.models function using es.mef.small data，error information： fitting ESC models: 1 : ESC_10 Error in checkSlotAssignment(object, name, value) : assignment of an object of class “function” is not valid for slot ‘defineComponent’ in an object of class “FLXMRglmC”; is(value, "expression") is not TRUE

JEFworks commented 7 years ago

Please see the solution in the closed issues https://github.com/hms-dbmi/scde/issues/40

mittalan commented 4 years ago

I was facing the same issue and installing flexmix 2.3-13 did not help. I was able to make it work by installing scde version 1.99.1. The package version is available from the scde webpage.