search

hms-dbmi / scde

R package for analyzing single-cell RNA-seq data
http://pklab.med.harvard.edu/scde
Other
172 stars 66 forks source link

Correspondence between GitHub and Bioconductor verison numbers #57

Open jdblischak opened 6 years ago

jdblischak commented 6 years ago

Would it be possible to document the relationship between the version numbers of the GitHub releases and the Bioconductor releases?

There are 3 releases on GitHub: 1.99.0, 1.99.1, and 1.99.2

https://github.com/hms-dbmi/scde/releases

And the current GitHub version is 1.99.4.

There are 4 releases on Bioconductor: 2.0.1 (BioC 3.3), 2.2.0 (BioC 3.4), 2.4.1 (BioC 3.5), and 2.6.0 (BioC 3.6).

https://www.bioconductor.org/packages/3.3/bioc/html/scde.html https://www.bioconductor.org/packages/3.4/bioc/html/scde.html https://www.bioconductor.org/packages/3.5/bioc/html/scde.html https://www.bioconductor.org/packages/3.6/bioc/html/scde.html

Documenting this somewhere in the README.md, NEWS, and/or the releases page would be convenient for debugging between versions. Thanks!

jdblischak commented 6 years ago

Also, the 1.99.2 release has the version listed as 1.99.1 in the DESCRIPTION file, so R has no way to distinguish which of the releases was installed:

https://github.com/hms-dbmi/scde/blob/1.99.2/DESCRIPTION#L4