ES/MEF cell dataset published by Islam et al

hms-dbmi / scde

R package for analyzing single-cell RNA-seq data

http://pklab.med.harvard.edu/scde

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ES/MEF cell dataset published by Islam et al #87

Open dalibor49 opened 3 years ago

dalibor49 commented 3 years ago

Hello, and sorry for asking this here,

i saw that in you paper you used ES/MEF cell dataset published by Islam et al. I want to use this dataset to benchmark some single cell DE tools but i can not find ground truth for 1000 TOP DE genes i see being used in papers. Can you provide me some instructions on how to find/get this data?

Thanks in advance, Dalibor