Closed xinaesthete closed 10 months ago
Do you have an example dataset to share? This seems to be an issue with the parsing of the OME-XML metadata <Description>
tag. I have made a PR to allow for an unknown
type for the description, but the latter error seems related to the pixel data, which is very hard to debug without a source image.
Describe the bug
Trying to load OME-TIFFs into Avivator, or using the
loadOmeTiff
function, leads to errors.This is console output from the current Avivator website when loading an image that was previously working:
I tried loading the same into a local forked version (https://github.com/xinaesthete/viv/tree/context2, see my discussion thread), and it did work there. I switched that local version to main (commit a1a8007), updated dependencies, and now I get a different error for that image:
To Reproduce I'm not sure what data I have that I could share, but can look into that if it will help.
Environment: