hoelzer-lab / rnaflow

A simple RNA-Seq differential gene expression pipeline using Nextflow
GNU General Public License v3.0
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fix bad character " ' " in gene names crashing deseq2.R , closes #177 #189

Closed fischer-hub closed 2 years ago

fischer-hub commented 2 years ago

Fixed an issue where gene names containing single quotes were interpreted as string delimiters in the R script leading to wrong and differing gene names in downstream dataframes which caused empty dataframes when trying to merge over the wrong gene names. This then crashed the EnhancedVolcano function.