Polishing evaluation - Githubissues

hoelzer / mgnify-lr

Evaluation of long-read support for the MGnify pipeline

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Open hoelzer opened 4 years ago

hoelzer commented 4 years ago

Compare Ideel plots.

hoelzer commented 4 years ago

Current best practice seems to be

flye + racon4x + medaka1x (+ pilon2x in case of short reads)

but that's really slow, except when using GPU

hoelzer commented 4 years ago

realated to #41