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hoelzer
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mgnify-lr
Evaluation of long-read support for the MGnify pipeline
GNU General Public License v3.0
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Revision 2024
#49
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hoelzer
closed
9 months ago
hoelzer
commented
9 months ago
tested, fixed some syntax errors, improved profile handling
focus: ONT-only assembly
Some changes in racon based on: ncbi.nlm.nih.gov/pmc/articles/PMC9861289/
flye does not need --plasmids and --genome_size anymore
thus, also skipping the whole genome size estimations step