Slicing to end of chromosome doesn't work

hoffmangroup / genomedata

The Genomedata format for storing large-scale functional genomics data.

https://genomedata.hoffmanlab.org/

GNU General Public License v2.0

2 stars 1 forks source link

Slicing to end of chromosome doesn't work #7

Open EricR86 opened 10 years ago

EricR86 commented 10 years ago

Original report (archived issue) by Eric Roberts (Bitbucket: ericr86, GitHub: ericr86).

From Google Code Issue #9

Imported Labels: enhancement, imported, Priority-Low

From orion.bu...@gmail.com on January 26, 2010 18:05:13

When loading the sequence, it would be useful to store a sequence length attribute so Chromosome objects know their length. This would allow full slicing and provide a more straightforward behavior for Chromosome slicing.

Original issue: http://code.google.com/p/genomedata/issues/detail?id=9

EricR86 commented 10 years ago

Original comment by Eric Roberts (Bitbucket: ericr86, GitHub: ericr86).

From orion.bu...@gmail.com on June 01, 2010 17:53:35

As of 1.2.0, Chromosomes now know their length (stored in chromosome.end), but slicing has not been edited to take this into account.

EricR86 commented 10 years ago

Original comment by Eric Roberts (Bitbucket: ericr86, GitHub: ericr86).

Edited issue description* set assignee to "ericr86 (Bitbucket: ericr86, GitHub: ericr86)"
set assignee_account_id to "557058:c80ca578-03a1-4ac6-b3ee-50372a3fceee"

EricR86 commented 10 years ago

Original comment by Michael Hoffman (Bitbucket: hoffman, GitHub: michaelmhoffman).

changed priority from "trivial" to "minor"
changed kind from "enhancement" to "bug"
changed title from "Add sequence length attribute" to "Slicing to end of chromosome doesn't work"