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hoffmangroup / segway

Application for semi-automated genomic annotation.
http://segway.hoffmanlab.org/
GNU General Public License v2.0
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Error for training #103

Closed EricR86 closed 7 years ago

EricR86 commented 7 years ago

Original report (BitBucket issue) by Anonymous.

Hi, I've got an error message like the following when running segway training. I wonder how I can fix this. Thanks!

Error: reading diagonal covariance matrix 'covar_t1' (from file '/Users/zhichengji/Dropbox/dynamo/segway/train/params/input.master' line 192), but covariance[0] = (0.000000e+00) < current Floor = (1.000000e-10)

EricR86 commented 7 years ago

Original comment by Eric Roberts (Bitbucket: ericr86, GitHub: ericr86).

This was resolved as a strange input error where all the values are equal.

This was resolved on the mailing list here: http://mailman13.u.washington.edu/pipermail/segway-users/2017-March/000434.html

Issue #104 was raised to follow up with potential enhancements to avoid this issue in the future.