segway --num-labels=4 train test.genomedata traindir
traindir/observations/chr21.0000.float32 (9411193, 9595548)
PROGRAM ENDED SUCCESSFULLY WITH STATUS 0 AT Tuesday November 22 2016, 15:36:50 CET
running locally 1: emt0.0.0.traindir.1ac69340b0c111e6a5ac989096c35828 ()
running locally 2: emt0.0.0.traindir.1ac69340b0c111e6a5ac989096c35828 ()
Traceback (most recent call last):
File "/usr/local/bin/segway", line 11, in
sys.exit(main())
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 3030, in main
return runner()
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 2823, in call
self.run(*args, kwargs)
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 2790, in run
self.run_train()
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 2334, in run_train
instance_params = run_train_func(self.num_segs_range)
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 2343, in run_train_singlethread
res = [self.run_train_instance()]
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 2222, in run_train_instance
round_index, kwargs)
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 2229, in progress_train_instance
self.run_train_round(self.instance_index, round_index, kwargs)
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 2173, in run_train_round
restartable_jobs.wait()
File "/usr/local/lib/python2.7/dist-packages/segway/cluster/init.py", line 306, in wait
self.process_job(jobid, job_info)
File "/usr/local/lib/python2.7/dist-packages/segway/cluster/init.py", line 258, in process_job
(jobid, job_name, error_filename))
RuntimeError:
Submitted Job (2) failed. Failed Job: emt0.0.0.traindir.1ac69340b0c111e6a5ac989096c35828.
For details, check error messages in traindir/output/e/0/emt0.0.0.traindir.1ac69340b0c111e6a5ac989096c35828.
See the Troubleshooting section of the Segway documentation.
EricR86
commented
7 years ago
Original report (BitBucket issue) by Anonymous.
segway --num-labels=4 train test.genomedata traindir traindir/observations/chr21.0000.float32 (9411193, 9595548) PROGRAM ENDED SUCCESSFULLY WITH STATUS 0 AT Tuesday November 22 2016, 15:36:50 CET running locally 1: emt0.0.0.traindir.1ac69340b0c111e6a5ac989096c35828 () running locally 2: emt0.0.0.traindir.1ac69340b0c111e6a5ac989096c35828 () Traceback (most recent call last): File "/usr/local/bin/segway", line 11, in
sys.exit(main())
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 3030, in main
return runner()
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 2823, in call
self.run(*args, kwargs)
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 2790, in run
self.run_train()
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 2334, in run_train
instance_params = run_train_func(self.num_segs_range)
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 2343, in run_train_singlethread
res = [self.run_train_instance()]
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 2222, in run_train_instance
round_index, kwargs)
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 2229, in progress_train_instance
self.run_train_round(self.instance_index, round_index, kwargs)
File "/usr/local/lib/python2.7/dist-packages/segway/run.py", line 2173, in run_train_round
restartable_jobs.wait()
File "/usr/local/lib/python2.7/dist-packages/segway/cluster/init.py", line 306, in wait
self.process_job(jobid, job_info)
File "/usr/local/lib/python2.7/dist-packages/segway/cluster/init.py", line 258, in process_job
(jobid, job_name, error_filename))
RuntimeError:
Submitted Job (2) failed. Failed Job: emt0.0.0.traindir.1ac69340b0c111e6a5ac989096c35828.
For details, check error messages in traindir/output/e/0/emt0.0.0.traindir.1ac69340b0c111e6a5ac989096c35828.
See the Troubleshooting section of the Segway documentation.