Closed stephenholtz closed 1 year ago
OSX Ventura 13.2.1, using a minimal poetry environment in the terminal or vscode.
python = "3.11.*" numpy = "^1.24.3" datashader = "^0.14.4" pandas = "^2.0.2" ipykernel = "^6.23.1"
This code produces the np.warnings error.
np.warnings
import numpy as np import pandas as pd import datashader as ds data = pd.DataFrame({'x': np.arange(0, 100), 'y': np.arange(0, 100)}) ds.Canvas().line(data, 'x', 'y') ds.__version__ # '0.14.4' np.__version__ # '1.24.3'
traceback:
AttributeError Traceback (most recent call last) Cell In[7], line 4 1 import pandas as pd 3 data = pd.DataFrame({'x': np.arange(0, 100), 'y': np.arange(0, 100)}) ----> 4 ds.Canvas().line(data, 'x', 'y') File [~/Library/Caches/pypoetry/virtualenvs/antenna-analysis-rqYsAEN9-py3.11/lib/python3.11/site-packages/datashader/core.py:450](https://file+.vscode-resource.vscode-cdn.net/Users/stephenholtz/repos/antenna-analysis/preprocessing/~/Library/Caches/pypoetry/virtualenvs/antenna-analysis-rqYsAEN9-py3.11/lib/python3.11/site-packages/datashader/core.py:450), in Canvas.line(self, source, x, y, agg, axis, geometry, line_width, antialias) 443 if not isinstance(non_cat_agg, ( 444 rd.any, rd.count, rd.max, rd.min, rd.sum, rd.summary, rd._sum_zero, 445 rd.first, rd.last, rd.mean, rd.where 446 )): 447 raise NotImplementedError( 448 f"{type(non_cat_agg)} reduction not implemented for antialiased lines") --> 450 return bypixel(source, self, glyph, agg, antialias=glyph.antialiased) File [~/Library/Caches/pypoetry/virtualenvs/antenna-analysis-rqYsAEN9-py3.11/lib/python3.11/site-packages/datashader/core.py:1258](https://file+.vscode-resource.vscode-cdn.net/Users/stephenholtz/repos/antenna-analysis/preprocessing/~/Library/Caches/pypoetry/virtualenvs/antenna-analysis-rqYsAEN9-py3.11/lib/python3.11/site-packages/datashader/core.py:1258), in bypixel(source, canvas, glyph, agg, antialias) 1255 canvas.validate() 1257 # All-NaN objects (e.g. chunks of arrays with no data) are valid in Datashader -> 1258 with np.warnings.catch_warnings(): 1259 np.warnings.filterwarnings('ignore', r'All-NaN (slice|axis) encountered') 1260 return bypixel.pipeline(source, schema, canvas, glyph, agg, antialias=antialias) File [~/Library/Caches/pypoetry/virtualenvs/antenna-analysis-rqYsAEN9-py3.11/lib/python3.11/site-packages/numpy/__init__.py:320](https://file+.vscode-resource.vscode-cdn.net/Users/stephenholtz/repos/antenna-analysis/preprocessing/~/Library/Caches/pypoetry/virtualenvs/antenna-analysis-rqYsAEN9-py3.11/lib/python3.11/site-packages/numpy/__init__.py:320), in __getattr__(attr) 317 from .testing import Tester 318 return Tester --> 320 raise AttributeError("module {!r} has no attribute " 321 "{!r}".format(__name__, attr)) AttributeError: module 'numpy' has no attribute 'warnings'
With numpy 1.23 this does not occur, it seems np.warnings was just warnings, however so hopefully this can be safely replaced with warnings.
warnings
It appears sklearn had a similar issue: https://github.com/scikit-learn/scikit-learn/pull/23654 (from here https://stackoverflow.com/questions/74863592/attributeerror-module-numpy-has-no-attribute-warnings)
I can try to fix this in a PR in the next day or so, unless someone else prefers to handle it.
Thank you for offering your help.
This is fixed in the latest datashader release 0.15, which was released this week.
OSX Ventura 13.2.1, using a minimal poetry environment in the terminal or vscode.
This code produces the
np.warnings
error.traceback:
With numpy 1.23 this does not occur, it seems np.warnings was just
warnings
, however so hopefully this can be safely replaced withwarnings
.It appears sklearn had a similar issue: https://github.com/scikit-learn/scikit-learn/pull/23654 (from here https://stackoverflow.com/questions/74863592/attributeerror-module-numpy-has-no-attribute-warnings)
I can try to fix this in a PR in the next day or so, unless someone else prefers to handle it.