Open Emptyset110 opened 5 months ago
conda env create --name=fastfold -f environment.yml shows lots of conflicts
conda env create --name=fastfold -f environment.yml
Package xorg-libx11 conflicts for: conda-forge::python=3.8 -> pypy3.8=7.3.11 -> xorg-libx11[version='>=1.8.4,<2.0a0|>=1.8.6,<2.0a0'] pytorch::torchvision -> ffmpeg[version='>=4.2'] -> xorg-libx11[version='>=1.8.7,<2.0a0'] Package pytorch conflicts for: pytorch::torchaudio -> pytorch[version='1.10.0|1.10.1|1.10.2|1.11.0|1.12.0|1.12.1|1.13.0|1.13.1|2.0.0|2.0.1|2.1.0|2.1.1|2.1.2|2.2.0|1.9.1|1.9.0|1.8.1|1.8.0|1.7.1|1.7.0|1.6.0|1.5.1'] pytorch::pytorch=1.12 pytorch|pytorch::pytorch=1.12 pytorch::torchvision -> pytorch[version='1.10.0|1.10.1|1.10.2|1.11.0|1.12.0|1.12.1|1.13.0|1.13.1|2.0.0|2.0.1|2.1.0|2.1.1|2.1.2|2.2.0|1.9.1|1.9.0|1.8.1|1.8.0|1.7.1|1.7.0|1.6.0|1.5.1'] Package pytorch-cuda conflicts for: pytorch::torchaudio -> pytorch==2.2.0 -> pytorch-cuda[version='>=11.6,<11.7|>=11.7,<11.8|>=11.8,<11.9|>=12.1,<12.2'] pytorch::torchaudio -> pytorch-cuda[version='11.6.*|11.7.*|11.8.*|12.1.*'] Package certifi conflicts for: conda-forge::pip -> setuptools -> certifi[version='>=2016.09|>=2016.9.26'] pytorch::torchvision -> requests -> certifi[version='>=2017.4.17'] conda-forge::pdbfixer -> setuptools -> certifi[version='>=2016.09|>=2016.9.26'] Package ca-certificates conflicts for: bioconda::hhsuite==3.3.0 -> python[version='>=2.7,<2.8.0a0'] -> ca-certificates conda-forge::pip -> python -> ca-certificates conda-forge::python=3.8 -> openssl[version='>=3.2.0,<4.0a0'] -> ca-certificates Package openmm conflicts for: conda-forge::openmm=7.7.0 conda-forge::pdbfixer -> openmm[version='>=7.5|>=7.6|>=8.0']The following specifications were found to be incompatible with your system: - feature:/linux-64::__cuda==12.3=0 - feature:/linux-64::__glibc==2.31=0 - feature:|@/linux-64::__cuda==12.3=0 - feature:|@/linux-64::__glibc==2.31=0 - bioconda::hhsuite==3.3.0 -> libgcc-ng[version='>=10.3.0'] -> __glibc[version='>=2.17'] - bioconda::hmmer==3.3.2 -> libgcc-ng[version='>=10.3.0'] -> __glibc[version='>=2.17'] - bioconda::kalign2==2.04 -> libgcc-ng[version='>=10.3.0'] -> __glibc[version='>=2.17'] - conda-forge::cudatoolkit=11.3 -> __glibc[version='>=2.17,<3.0.a0'] - conda-forge::cudatoolkit=11.3 -> libgcc-ng[version='>=10.3.0'] -> __glibc[version='>=2.17'] - conda-forge::pdbfixer -> openmm[version='>=8.0'] -> __glibc[version='>=2.17|>=2.17,<3.0.a0'] - conda-forge::python=3.8 -> libgcc-ng[version='>=10.3.0'] -> __glibc[version='>=2.17'] - pytorch::pytorch=1.12 -> cudatoolkit[version='>=11.3,<11.4'] -> __glibc[version='>=2.17,<3.0.a0'] - pytorch::torchaudio -> pytorch==2.1.2 -> __cuda[version='>=11.8'] - pytorch::torchaudio -> pytorch==2.1.2 -> __glibc[version='>=2.17|>=2.17,<3.0.a0'] - pytorch::torchvision -> pytorch==2.1.2 -> __cuda[version='>=11.8'] - pytorch::torchvision -> pytorch==2.1.2 -> __glibc[version='>=2.17|>=2.17,<3.0.a0'] Your installed version is: 2.31 Note that strict channel priority may have removed packages required for satisfiability.
conda env create --name=fastfold -f environment.yml
shows lots of conflicts