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viromes
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nomis - depolymerases
#3
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hpeter0803
opened
3 years ago
hpeter0803
commented
3 years ago
[x] curate depolymerase protein database (remove redundancies, construct tree,...)
[ ] extend and curate depolymerase database by homology searches in IMG VR 3
[ ] identify (blast) depolymerases in viral genomes (complete viral genomes only?), extract taxonomy of phages harboring depolymerases
susheelbhanu
commented
3 years ago
Methods for redundancy removal:
CDHit or MMseqs2