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hputnam / Meth_Compare

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Map reads and extract methylation for Pact reads against C1 Symbiodinium genome #20

Closed hputnam closed 4 years ago

hputnam commented 4 years ago

Can we run the same mapping for Pact with the C1 Symbiodinium Genome as well?

sr320 commented 4 years ago

Running now - code https://github.com/hputnam/Meth_Compare/blob/master/scripts/mox/0323_1000.sh

sr320 commented 4 years ago

update status: aligned 7/9 files

sr320 commented 4 years ago

little bug in code (fixed) running with mod script https://github.com/hputnam/Meth_Compare/blob/master/scripts/mox/0323_1000-2.sh Running now. will end up at https://gannet.fish.washington.edu/seashell/bu-mox/scrubbed/032320-Pact-C1/Pact_C1/

sr320 commented 4 years ago

Complete! https://gannet.fish.washington.edu/seashell/bu-mox/scrubbed/032320-Pact-C1/Pact_C1/