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hrbrmstr / hilbertv4

Create and Annotate 'Hilbert Curve' 'IPv4' Heatmaps in R
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Won't install on R 3.6 or R 4.0 #2

Open adamkski opened 4 years ago

adamkski commented 4 years ago

Super excited to try a hilbert mapping viz. I will follow this post with the error messages from installing in R 4.0. Not sure what might be the cause?

√ checking for file 'C:\Users\adam.kowalczewski\AppData\Local\Temp\RtmpE1MPIf\remotes1ec450f06252\hrbrmstr-hilbertv4-c3ca42a/DESCRIPTION' (1.4s)

  • preparing 'hilbertv4': (1.2s) √ checking DESCRIPTION meta-information ...
  • cleaning src
  • checking for LF line-endings in source and make files and shell scripts
  • checking for empty or unneeded directories
  • building 'hilbertv4_0.1.0.tar.gz'

Installing package into ‘C:/Users/adam.kowalczewski/Documents/R/win-library/3.6’ (as ‘lib’ is unspecified) Applying site configuration...Done.

  • installing source package 'hilbertv4' ... using staged installation libs

*** arch - i386 C:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I"C:/Users/adam.kowalczewski/Documents/R/win-library/3.6/BH/include" -I"C:/Users/adam.kowalczewski/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/adam.kowalczewski/Documents/R/win-library/3.6/AsioHeaders/include" -O2 -Wall -mtune=generic -c RcppExports.cpp -o RcppExports.o C:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I"C:/Users/adam.kowalczewski/Documents/R/win-library/3.6/BH/include" -I"C:/Users/adam.kowalczewski/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/adam.kowalczewski/Documents/R/win-library/3.6/AsioHeaders/include" -O2 -Wall -mtune=generic -c cidr-box.cpp -o cidr-box.o C:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA~1/R/R-36~1.1/include" -DNDEBUG -I"C:/Users/adam.kowalczewski/Documents/R/win-library/3.6/BH/include" -I"C:/Users/adam.kowalczewski/Documents/R/win-library/3.6/Rcpp/include" -I"C:/Users/adam.kowalczewski/Documents/R/win-library/3.6/AsioHeaders/include" -O2 -Wall -mtune=generic -c hilbertv4.cpp -o hilbertv4.o C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o hilbertv4.dll tmp.def RcppExports.o cidr-box.o hilbertv4.o -LC:/PROGRA~1/R/R-36~1.1/bin/i386 -lR cidr-box.o:cidr-box.cpp:(.text+0x1c1): undefined reference to _imp__WSACleanup@0' cidr-box.o:cidr-box.cpp:(.text+0x201): undefined reference to_impWSAStartup@8' cidr-box.o:cidr-box.cpp:(.text+0x5f8): undefined reference to _imp__WSASetLastError@4' cidr-box.o:cidr-box.cpp:(.text+0x632): undefined reference to_impWSAStringToAddressA@20' cidr-box.o:cidr-box.cpp:(.text+0x64e): undefined reference to _imp__WSAGetLastError@0' cidr-box.o:cidr-box.cpp:(.text+0x684): undefined reference to_imp__ntohl@4' collect2.exe: error: ld returned 1 exit status no DLL was created ERROR: compilation failed for package 'hilbertv4'

  • removing 'C:/Users/adam.kowalczewski/Documents/R/win-library/3.6/hilbertv4'
adamkski commented 4 years ago

And here's the messages from R 4.0 (3.6 is what we are limited to at work).

√ checking for file 'C:\Users\kowal\AppData\Local\Temp\RtmpoPIk2x\remotes15f4426349ff\hrbrmstr-hilbertv4-c3ca42a/DESCRIPTION' (343ms)

  • preparing 'hilbertv4': √ checking DESCRIPTION meta-information ...
  • cleaning src
  • checking for LF line-endings in source and make files and shell scripts
  • checking for empty or unneeded directories
  • building 'hilbertv4_0.1.0.tar.gz'

Installing package into ‘C:/Users/kowal/Documents/R/win-library/4.0’ (as ‘lib’ is unspecified)

  • installing source package 'hilbertv4' ... using staged installation libs

*** arch - i386 "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-40~1.0/include" -DNDEBUG -I'C:/Users/kowal/Documents/R/win-library/4.0/BH/include' -I'C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include' -I'C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-40~1.0/include" -DNDEBUG -I'C:/Users/kowal/Documents/R/win-library/4.0/BH/include' -I'C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include' -I'C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c cidr-box.cpp -o cidr-box.o In file included from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/smart_ptr/shared_ptr.hpp:28, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/shared_ptr.hpp:17, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/date_time/time_clock.hpp:17, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/date_time/posix_time/posix_time_types.hpp:10, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio/time_traits.hpp:23, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio/basic_deadline_timer.hpp:28, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio.hpp:22, from cidr-box.cpp:9: C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/smart_ptr/detail/shared_count.hpp:356:33: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] explicit shared_count( std::autoptr & r ): pi( new sp_counted_impl_p( r.get() ) ) ^~~~ In file included from C:/rtools40/mingw32/include/c++/8.3.0/bits/locale_conv.h:41, from C:/rtools40/mingw32/include/c++/8.3.0/locale:43, from C:/rtools40/mingw32/include/c++/8.3.0/iomanip:43, from C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include/RcppCommon.h:52, from C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include/Rcpp.h:27, from cidr-box.cpp:3: C:/rtools40/mingw32/include/c++/8.3.0/bits/unique_ptr.h:53:28: note: declared here template class auto_ptr; ^~~~ In file included from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/shared_ptr.hpp:17, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/date_time/time_clock.hpp:17, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/date_time/posix_time/posix_time_types.hpp:10, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio/time_traits.hpp:23, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio/basic_deadline_timer.hpp:28, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio.hpp:22, from cidr-box.cpp:9: C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/smart_ptr/shared_ptr.hpp:256:65: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R > ^~~~ In file included from C:/rtools40/mingw32/include/c++/8.3.0/bits/locale_conv.h:41, from C:/rtools40/mingw32/include/c++/8.3.0/locale:43, from C:/rtools40/mingw32/include/c++/8.3.0/iomanip:43, from C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include/RcppCommon.h:52, from C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include/Rcpp.h:27, from cidr-box.cpp:3: C:/rtools40/mingw32/include/c++/8.3.0/bits/unique_ptr.h:53:28: note: declared here template class auto_ptr; ^~~~ In file included from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/shared_ptr.hpp:17, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/date_time/time_clock.hpp:17, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/date_time/posix_time/posix_time_types.hpp:10, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio/time_traits.hpp:23, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio/basic_deadline_timer.hpp:28, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio.hpp:22, from cidr-box.cpp:9: C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/smart_ptr/shared_ptr.hpp:471:31: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] explicit shared_ptr( std::auto_ptr & r ): px(r.get()), pn() ^~~~ In file included from C:/rtools40/mingw32/include/c++/8.3.0/bits/locale_conv.h:41, from C:/rtools40/mingw32/include/c++/8.3.0/locale:43, from C:/rtools40/mingw32/include/c++/8.3.0/iomanip:43, from C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include/RcppCommon.h:52, from C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include/Rcpp.h:27, from cidr-box.cpp:3: C:/rtools40/mingw32/include/c++/8.3.0/bits/unique_ptr.h:53:28: note: declared here template class auto_ptr; ^~~~ In file included from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/shared_ptr.hpp:17, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/date_time/time_clock.hpp:17, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/date_time/posix_time/posix_time_types.hpp:10, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio/time_traits.hpp:23, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio/basic_deadline_timer.hpp:28, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio.hpp:22, from cidr-box.cpp:9: C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/smart_ptr/shared_ptr.hpp:484:22: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] shared_ptr( std::auto_ptr && r ): px(r.get()), pn() ^~~~ In file included from C:/rtools40/mingw32/include/c++/8.3.0/bits/locale_conv.h:41, from C:/rtools40/mingw32/include/c++/8.3.0/locale:43, from C:/rtools40/mingw32/include/c++/8.3.0/iomanip:43, from C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include/RcppCommon.h:52, from C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include/Rcpp.h:27, from cidr-box.cpp:3: C:/rtools40/mingw32/include/c++/8.3.0/bits/unique_ptr.h:53:28: note: declared here template class auto_ptr; ^~~~ In file included from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/shared_ptr.hpp:17, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/date_time/time_clock.hpp:17, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/date_time/posix_time/posix_time_types.hpp:10, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio/time_traits.hpp:23, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio/basic_deadline_timer.hpp:28, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio.hpp:22, from cidr-box.cpp:9: C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/smart_ptr/shared_ptr.hpp:567:34: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] shared_ptr & operator=( std::auto_ptr & r ) ^~~~ In file included from C:/rtools40/mingw32/include/c++/8.3.0/bits/locale_conv.h:41, from C:/rtools40/mingw32/include/c++/8.3.0/locale:43, from C:/rtools40/mingw32/include/c++/8.3.0/iomanip:43, from C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include/RcppCommon.h:52, from C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include/Rcpp.h:27, from cidr-box.cpp:3: C:/rtools40/mingw32/include/c++/8.3.0/bits/unique_ptr.h:53:28: note: declared here template class auto_ptr; ^~~~ In file included from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/shared_ptr.hpp:17, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/date_time/time_clock.hpp:17, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/date_time/posix_time/posix_time_types.hpp:10, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio/time_traits.hpp:23, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio/basic_deadline_timer.hpp:28, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio.hpp:22, from cidr-box.cpp:9: C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/smart_ptr/shared_ptr.hpp:576:34: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] shared_ptr & operator=( std::auto_ptr && r ) ^~~~ In file included from C:/rtools40/mingw32/include/c++/8.3.0/bits/locale_conv.h:41, from C:/rtools40/mingw32/include/c++/8.3.0/locale:43, from C:/rtools40/mingw32/include/c++/8.3.0/iomanip:43, from C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include/RcppCommon.h:52, from C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include/Rcpp.h:27, from cidr-box.cpp:3: C:/rtools40/mingw32/include/c++/8.3.0/bits/unique_ptr.h:53:28: note: declared here template class auto_ptr; ^~~~ In file included from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/shared_ptr.hpp:17, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/date_time/time_clock.hpp:17, from C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/date_time/posix_time/posix_time_types.hpp:10, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio/time_traits.hpp:23, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio/basic_deadline_timer.hpp:28, from C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include/asio.hpp:22, from cidr-box.cpp:9: C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function 'boost::shared_ptr& boost::shared_ptr::operator=(std::auto_ptr<_Up>&&)': C:/Users/kowal/Documents/R/win-library/4.0/BH/include/boost/smart_ptr/shared_ptr.hpp:578:38: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] this_type( static_cast< std::auto_ptr && >( r ) ).swap( this ); ^~~~ In file included from C:/rtools40/mingw32/include/c++/8.3.0/bits/locale_conv.h:41, from C:/rtools40/mingw32/include/c++/8.3.0/locale:43, from C:/rtools40/mingw32/include/c++/8.3.0/iomanip:43, from C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include/RcppCommon.h:52, from C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include/Rcpp.h:27, from cidr-box.cpp:3: C:/rtools40/mingw32/include/c++/8.3.0/bits/unique_ptr.h:53:28: note: declared here template class auto_ptr; ^~~~ cidr-box.cpp: In function 'int cidr_parse(const char, unsigned int, unsigned int, int)': cidr-box.cpp:65:10: warning: 'char strncpy(char, const char, size_t)' specified bound 24 equals destination size [-Wstringop-truncation] strncpy(cidr_copy, cidr, 24);


"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/PROGRA~1/R/R-40~1.0/include" -DNDEBUG  -I'C:/Users/kowal/Documents/R/win-library/4.0/BH/include' -I'C:/Users/kowal/Documents/R/win-library/4.0/Rcpp/include' -I'C:/Users/kowal/Documents/R/win-library/4.0/AsioHeaders/include'        -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c hilbertv4.cpp -o hilbertv4.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o hilbertv4.dll tmp.def RcppExports.o cidr-box.o hilbertv4.o -LC:/PROGRA~1/R/R-40~1.0/bin/i386 -lR
C:/rtools40/mingw32/bin/../lib/gcc/i686-w64-mingw32/8.3.0/../../../../i686-w64-mingw32/bin/ld.exe: cidr-box.o:cidr-box.cpp:(.text+0x3a2): undefined reference to `_imp__WSACleanup@0'
C:/rtools40/mingw32/bin/../lib/gcc/i686-w64-mingw32/8.3.0/../../../../i686-w64-mingw32/bin/ld.exe: cidr-box.o:cidr-box.cpp:(.text+0x3e1): undefined reference to `_imp__WSAStartup@8'
C:/rtools40/mingw32/bin/../lib/gcc/i686-w64-mingw32/8.3.0/../../../../i686-w64-mingw32/bin/ld.exe: cidr-box.o:cidr-box.cpp:(.text+0x6d0): undefined reference to `_imp__WSASetLastError@4'
C:/rtools40/mingw32/bin/../lib/gcc/i686-w64-mingw32/8.3.0/../../../../i686-w64-mingw32/bin/ld.exe: cidr-box.o:cidr-box.cpp:(.text+0x70a): undefined reference to `_imp__WSAStringToAddressA@20'
C:/rtools40/mingw32/bin/../lib/gcc/i686-w64-mingw32/8.3.0/../../../../i686-w64-mingw32/bin/ld.exe: cidr-box.o:cidr-box.cpp:(.text+0x724): undefined reference to `_imp__WSAGetLastError@0'
C:/rtools40/mingw32/bin/../lib/gcc/i686-w64-mingw32/8.3.0/../../../../i686-w64-mingw32/bin/ld.exe: cidr-box.o:cidr-box.cpp:(.text+0x73b): undefined reference to `_imp__ntohl@4'
collect2.exe: error: ld returned 1 exit status
no DLL was created
ERROR: compilation failed for package 'hilbertv4'
* removing 'C:/Users/kowal/Documents/R/win-library/4.0/hilbertv4'
Error: Failed to install 'hilbertv4' from GitHub:
  (converted from warning) installation of package ‘C:/Users/kowal/AppData/Local/Temp/RtmpoPIk2x/file15f432beb41/hilbertv4_0.1.0.tar.gz’ had non-zero exit status