installation error: argument is of length zero

hredestig / pcaMethods

Perform PCA on data with missing values in R

GNU General Public License v2.0

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installation error: argument is of length zero #9

Closed fentouxungui closed 4 years ago

fentouxungui commented 5 years ago

R version 3.6.1 (2019-07-05) BiocManager::install(c("AnnotationDbi", "BiocGenerics", "GO.db", "pcaMethods"))

Error in if (nzchar(SHLIB_LIBADD)) SHLIB_LIBADD else character() : 
  argument is of length zero

Help!

fentouxungui commented 5 years ago

solved by:

conda install -c bioconda bioconductor-pcamethods

The following packages will be downloaded:

    package                    |            build
    ---------------------------|-----------------
    bioconductor-biobase-2.44.0|    r36h516909a_1         2.3 MB  bioconda
    bioconductor-biocgenerics-0.30.0|            r36_1         683 KB  bioconda
    bioconductor-pcamethods-1.76.0|    r36he1b5a44_1         1.1 MB  bioconda
    ------------------------------------------------------------
                                           Total:         4.0 MB

hredestig commented 4 years ago

Closing as can't reproduce and luckily you found a workaround