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hringbauer / ancIBD

Detecting IBD within low coverage ancient DNA data. Development Repository for software package that contains code for manuscript.
GNU General Public License v3.0
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add "StartBP&EndBP" to ancIBD output tsv file #11

Closed hyl317 closed 6 months ago

hyl317 commented 6 months ago

Should have made a more complete pull request message. A few more features are added:

  1. Users can provide a mask file to mask out IBD in potentially problematic genomic regions
  2. IBD2 calling on autosomes
  3. IBD calling on X chromosomes
  4. Output now also contains basepair coordinates