Hi @hrzhang1123 and thank you for your great work. Recently I have downloaded TCGA-LUAD and TCGA-LUSC datasets and have used the patch tiling code in your repo (level 1, 256x256 patch, 0.8 threshold) but have found that there are only about 3 million patches. I noticed that this TCGA dataset has very few levels and the higher level is 4 times smaller on each dimension than the lower level.
Can you provide some more details about the preprocessing on TCGA dataset?
Hi @hrzhang1123 and thank you for your great work. Recently I have downloaded TCGA-LUAD and TCGA-LUSC datasets and have used the patch tiling code in your repo (level 1, 256x256 patch, 0.8 threshold) but have found that there are only about 3 million patches. I noticed that this TCGA dataset has very few levels and the higher level is 4 times smaller on each dimension than the lower level.
Can you provide some more details about the preprocessing on TCGA dataset?