hsiangyuzhao / RCPS

official implementation of rectified contrastive pseudo supervision
MIT License
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关于数据 #13

Closed yyyyy-aa closed 6 months ago

yyyyy-aa commented 8 months ago

Thank you for your If you encounter issues downloading the data, you may find the same data at : https://academictorrents.com/details/80ecfefcabede760cdbdf63e38986501f7becd49 Please note that the orientation of the data downloaded from this link is not correct, please correct them manually. 请问这里的 "correct them manually"具体指什么呢?

hsiangyuzhao commented 8 months ago

The orientation of the data downloaded from this link is not correct, which means that if you read the image and label together, you will find the organs and labels are mismatching. Thus, you need to correct them manually with nibabel or SimpleITK.

yyyyy-aa commented 8 months ago

Hello, thank you for your patience and answer. At present, I have only downloaded the Atrial Segmentation dataset. May I ask whether I should first run prepare_la_dataset.py or preprocess_data before training? My current data folder is as follows. -RCPS-main -data -la_data -Training Set -Testing Set preprocess_data.py Unet.py la.csv pancreas.csv prepare_la_dataset.py prepare_pancreas_dataset.py preprocess_data.py Unet.py

yyyyy-aa commented 8 months ago

under RCPS-main/data/: -la_data la.csv pancreas.csv prepare_la_dataset.py prepare_pancreas_dataset.py preprocess_data.py Unet.py

under la_data folder: -Training Set -Testing Set preprocess_data.py Unet.py

zorcanz commented 8 months ago

bro,你的la_data放错了位置,直接放在data文件夹里面,然后再运行那两个脚本 la_data就直接放数据集了,不是整个文件,我昨天看你的这个文件位置给我误导了

yyyyy-aa commented 8 months ago

bro,你的la_data放错了位置,直接放在data文件夹里面,然后再运行那两个脚本 la_data就直接放数据集了,不是整个文件,我昨天看你的这个文件位置给我误导了

我的la_data文件夹就在data文件夹下,然后la_data下有解压出的训练和测试数据集,这样是对的吗,只需要运行prepare_la_dataset.py就行了嘛

yyyyy-aa commented 7 months ago

请问你[Pancreas-CT]的数据是怎么处理的啊