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hsieh42 / exit_process

Exit process and project boards for tracking issues.
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Mayo-Radiomics weekly benchmark #21

Closed hsieh42 closed 5 years ago

hsieh42 commented 5 years ago

Tests are performed weekly on benchmark dataset and results are saved in /cbica/projects/Mayo-Radiomics/Pipelines. Benchmark dataset: /cbica/projects/Mayo-Radiomics/Lists/MayoRadiomics_benchmark_img_20180807.list.

qsub -o /cbica/projects/Mayo-Radiomics/Pipelines/benchmark_${date}/logs \
         -l centos7 -t 1-$num_imgs \
         /cbica/projects/Mayo-Radiomics/Scripts/sendTexturePipeline_0.1.8.sh \
              /cbica/projects/Mayo-Radiomics/Lists/MayoRadiomics_benchmark_img_20180807.list \
              /cbica/projects/Mayo-Radiomics/pipelines/benchmark_$date/ \
              6.3 6.3 0

Document and Upload the analysis notebook so that @gastouna gets to know the process.

hsieh42 commented 5 years ago

Update: disk quota exceeded so no more write access. All weekly tests suspended until further notice.

hsieh42 commented 5 years ago

Closing the issue until we have more space.

gastouna commented 5 years ago

Benchmarking initiated today:

qsub -o /cbica/projects/Mayo-Radiomics/Pipelines/benchmark_20181205/logs \ -l centos7 -t 1-622 \ /cbica/projects/Mayo-Radiomics/Scripts/sendTexturePipeline_0.1.8.sh \ /cbica/projects/Mayo-Radiomics/Lists/MayoRadiomics_benchmark_img_20180807.list \ /cbica/projects/Mayo-Radiomics/pipelines/benchmark_20181205/ \ 6.3 6.3 0