Closed hsieh42 closed 6 years ago
Can we used Jupyter notebook in /cbica/CBIG/comp_space? I am getting this:
HTTP request sent; waiting for response.[I 16:43:05.369 NotebookApp] Accepting one-time-token-authenticated connection from 127.0.0.1 localhost cookie: _xsrf=2|dff4ceff|0cb97770fa0cb8953b0e47b1495b489e|1537994585 Allow? (Y/N/Always/neVer)
All of Script should necessarily be in comp_space of CBIG? For example, do we need to make a folder based on our name if any of us would like to tweak or modify the codes a little bit?
Thanks,
Can we used Jupyter notebook in /cbica/CBIG/comp_space? I am getting this:
HTTP request sent; waiting for response.[I 16:43:05.369 NotebookApp] Accepting one-time-token-authenticated connection from 127.0.0.1 localhost cookie: _xsrf=2|dff4ceff|0cb97770fa0cb8953b0e47b1495b489e|1537994585 Allow? (Y/N/Always/neVer)
Did you try any option? Did it work? jupyter-notebook on the cluster can be sometimes funny. You should report system issue to elog.
All of Script should necessarily be in comp_space of CBIG? For example, do we need to make a folder based on our name if any of us would like to tweak or modify the codes a little bit? Thanks,
@bhaghighi You are welcome to clone a copy of the code in the repo to any location you prefer. Always point the cfg file to the one in /cbica/comp_space/CBIG
. If you wish to tweak the code, you can do a pull request.
and upload the notebooks.
Sample data: one study from ctDNA and one mammographic study.