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hsieh42 / exit_process

Exit process and project boards for tracking issues.
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Resume texture pipeline processing for Mayo-Radiomics #30

Open hsieh42 opened 5 years ago

hsieh42 commented 5 years ago

The lattice texture pipeline has run 92247 images between 8/28/2018-9/20/2018. 92076 has final feature values in TextureFeature_mean.csv. The processing shall resume from image 92244 in /cbica/projects/Mayo-Radiomics/Lists/MayoRadiomics_all_img_20180809.list once the cluster transition is completed.

The command would be

qsub -o /cbica/projects/Mayo-Radiomics/Pipelines/TextureLattice_20180828/logs \
         -l centos7 -t 92244-169646 \
         /cbica/projects/Mayo-Radiomics/Scripts/sendTexturePipeline_0.1.8.sh \
              /cbica/projects/Mayo-Radiomics/Lists/MayoRadiomics_all_img_20180809.list \
              /cbica/projects/Mayo-Radiomics/pipelines/TextureLattice_20180828/ \
              6.3 6.3 0
gastouna commented 5 years ago

Resumed jobs today:

qsub -o /cbica/projects/Mayo-Radiomics/Pipelines/TextureLattice_20180828/logs \
         -l centos7 -t 92244-167245 \
         /cbica/projects/Mayo-Radiomics/Scripts/sendTexturePipeline_0.1.8.sh \
              /cbica/projects/Mayo-Radiomics/Lists/MayoRadiomics_all_img_20180809.list \
              /cbica/projects/Mayo-Radiomics/pipelines/TextureLattice_20180828/ \
              6.3 6.3 0