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huangyh09 / brie

BRIE: Bayesian Regression for Isoform Estimate in Single Cells
https://brie.readthedocs.io
Apache License 2.0
41 stars 15 forks source link

Installation failed #6

Closed yang91 closed 7 years ago

yang91 commented 7 years ago

Hi,

I've met error when installating brie, no matter using 'pip install' or downloading brie packages and using 'python setup.py install'.

Traceback (most recent call last):
  File "setup.py", line 11, in <module>
    import brie
  File "/home/yangxx/software/brie-v0.1.3/brie/__init__.py", line 8, in <module>
    from .utils.bias_utils import FastaFile, BiasFile
  File "/home/yangxx/software/brie-v0.1.3/brie/utils/bias_utils.py", line 6, in <module>
    import pylab as pl
ImportError: No module named pylab

I've tried to fink 'pylab' packages in PYPI but no package have the name exactly same as 'pylab'. My python version 2.7.12. Do you have any idea about this issue?

huangyh09 commented 7 years ago

Hi,

Thanks for using BRIE, and getting in touch.

The problem here is from the pylab package, which is probably not an independent library. I have turned this function off in the latest GitHub repo.

Please download and install it again. Let me know if you find any error.

Best wishes, Yuanhua

yang91 commented 7 years ago

Oh yes, this modification made installation successfully. Now it's all right, I'll keep in touch if another errors are produced in future. Thank you for your kindly help :)