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hubmapconsortium / antibody-api

API for the Antibody DB.
https://avr.hubmapconsortium.org/
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AVR website: support for comma delimited list for target_symbol, HGNC_ID, uniprot_accession_number #122

Open emquardokus opened 1 year ago

emquardokus commented 1 year ago

Expected values for target_symbol, HGNC_ID, and uniprot_accession_number is either a single value or a comma delimited list of values.

With synonym support based on HGNC database: related issue: https://github.com/hubmapconsortium/antibody-api/issues/103

Examples:

uniprot_accession_number HGNC_ID target_symbol
P55259 HGNC:4441 GP2
P01903, P01911 HGNC:4947, HGNC:4948 HLA-DRA, HLA-DRB1

Those represent a situation when the antibody recognizes a family of proteins, the antibody is a pan, meaning many, antibody.

emquardokus commented 1 year ago

Related issue: https://github.com/hubmapconsortium/antibody-api/issues/103

emquardokus commented 1 year ago

@ChuckKollar

ChuckKollar commented 1 year ago

This appears to be working using AVR_Pancreas_CODEX_OMAP13.csv as a test case.