hubmapconsortium / ccf-asct-reporter

HRA ASCT+B Reporter
https://hubmapconsortium.github.io/ccf-asct-reporter/
10 stars 5 forks source link

ASCT+B Reporter instance for Cell Typologies #740

Open katyb opened 1 year ago

katyb commented 1 year ago

J Yu needs to visualize OMAPs, Azimuth data overlaid on cell typologies. Please create a new instance of the ASCT+B Reporter with these Azimuth cell typologies in standard ASCT+B format loaded: https://github.com/hubmapconsortium/asctb-azimuth-data-comparison/tree/main/data/asctb_formatted_azimuth_data e.g., data for PBMC https://hubmapconsortium.github.io/asctb-azimuth-data-comparison/pbmc.csv data for bone marrow https://hubmapconsortium.github.io/asctb-azimuth-data-comparison/bone_marrow.csv data for brain https://hubmapconsortium.github.io/asctb-azimuth-data-comparison/motor_cortex.csv data for fetal https://hubmapconsortium.github.io/asctb-azimuth-data-comparison/fetal_development.csv etc. all linked from https://hubmapconsortium.github.io/asctb-azimuth-data-comparison/ also.

bherr2 commented 1 year ago

@katyb PR is here: https://github.com/hubmapconsortium/ccf-asct-reporter/pull/741

Build Preview is here: https://64dbe69da8668a3603f2a95c--ccf-asct-reporter.netlify.app/

Will add more tables tomorrow.

Thanks, Bruce