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hubmapconsortium / codex-pipeline

CODEX data processing code
GNU General Public License v3.0
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Add pipeline option(s) to control CPU parallelization #23

Closed mruffalo closed 1 year ago

mruffalo commented 3 years ago

Some parts of this pipeline are CPU-intensive, and there's currently no user-visible mechanism to set the number of processes or threads. Add appropriate parameters/options to Python scripts and CWL wrappers, to set values used in places like this.

mruffalo commented 1 year ago

Addressed by #38.