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New acquisition instrument vendor and acquisition instrument models #15

Closed HerrLufty closed 8 months ago

HerrLufty commented 8 months ago

Select the target metadata schema name (can be multiple), or choose 'Other' if not listed.

Visium (no probes), Visium (with probes), Histology, CyCIF, Other

If 'Other' is selected, please enter the schema name below.

No response

Describe the change request (use a numbered list if many).

Add new acquisition instrument vendor = 'GE Healthcare"

Add new acquisition instrument models:

johardi commented 8 months ago

@HerrLufty You also chose "Other" for the target metadata schema. Do you know the specific name of it?

HerrLufty commented 8 months ago

I edited it afterwards and should've cleared that

From: Josef Hardi @.> Sent: Monday, March 18, 2024 1:05 PM To: hubmapconsortium/dataset-metadata-spreadsheet @.> Cc: Morgan, Richard Steven @.>; Mention @.> Subject: Re: [hubmapconsortium/dataset-metadata-spreadsheet] New acquisition instrument vendor and acquisition instrument models (Issue #15)

@HerrLuftyhttps://github.com/HerrLufty You also chose "Other" for the target metadata schema. Do you know the specific name of it?

- Reply to this email directly, view it on GitHubhttps://github.com/hubmapconsortium/dataset-metadata-spreadsheet/issues/15#issuecomment-2004464617, or unsubscribehttps://github.com/notifications/unsubscribe-auth/AEIO5BN5VFPJQR6EKRT437DYY4NDDAVCNFSM6AAAAABE3KNBX2VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDAMBUGQ3DINRRG4. You are receiving this because you were mentioned.Message ID: @.**@.>>

johardi commented 8 months ago

The "EasyScan One" model was already registered before but it is called "MoticEasyScan One."

HerrLufty commented 8 months ago

OK, let's use that name then

From: Josef Hardi @.> Sent: Monday, March 18, 2024 1:13 PM To: hubmapconsortium/dataset-metadata-spreadsheet @.> Cc: Morgan, Richard Steven @.>; Mention @.> Subject: Re: [hubmapconsortium/dataset-metadata-spreadsheet] New acquisition instrument vendor and acquisition instrument models (Issue #15)

The "EasyScan One" model was already registered before but it is called "MoticEasyScan One."

- Reply to this email directly, view it on GitHubhttps://github.com/hubmapconsortium/dataset-metadata-spreadsheet/issues/15#issuecomment-2004492098, or unsubscribehttps://github.com/notifications/unsubscribe-auth/AEIO5BMVNYM35A3PYWQURTTYY4OC7AVCNFSM6AAAAABE3KNBX2VHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDAMBUGQ4TEMBZHA. You are receiving this because you were mentioned.Message ID: @.**@.>>

johardi commented 8 months ago

The Visium datasets don't have acquisition instrument vendor and model but includes information on the preparation instrument vendor and model. Maybe that's what you're referring to.

HerrLufty commented 8 months ago

Hey @johardi it looks like Visium CytAssist - Visium (w/probes)and Visium (w/o probes): https://www.10xgenomics.com/instruments/visium-cytassist

was added as a preparation_insturment_vendor and model instead of acquisition_insturment_vendor and model

HerrLufty commented 8 months ago

Nevermind